Introduction | Running the search | NCBI API Key (Recommended) | Which genes get the most attention | The full matrix | Heatmaps | System Information

Introduction | Acknowledgments | NCBI API Key (Recommended) | Preparing Gene Sets | Making the gene lists from MSigDB | Fallback Example Dataset | Literature Analysis | Running PubMatrixR | Results Table | Visualization | Publication Count Bar Plots | Heatmap with Overlap Percentages | Clean Heatmap | Bar Plots for Asymmetric Lists | Summary | System Information

Overview | 1. theme_xkcd() — The XKCD Look | 2. xkcdaxis() — Hand-Drawn Axes | 3. geom_xkcdpath() — Wobbly Lines and Segments | 3a. Annotating a trend with a segment | 3b. Drawing a circle | 4. xkcdrect() — Fuzzy Rectangles | 5. xkcdman() — Stick Figures | 5a. Two penguin researchers | 5b. One stick figure per island | 6. Putting It All Together | Function Quick Reference

Introduction and Main Motivation | The XKCD Fonts | Saving the Graphs | Installing xkcd | Axis, Stick Figures, and Facets | Some Basic Examples | Line chart with stick figures | Mommy jittered-text example | Graph Gallery | Unemployment with Text Fill | Economic Projections | Regional Migration Pyramid | Mother's Day Schedule | Discussion | Package Dependencies | Key Functions Reference | xkcdaxis() | xkcdman() | xkcdrect() | geom_xkcdpath() | theme_xkcd() | Tips and Tricks | References

How xkcdman works | Part 1 — Anatomy diagram | Part 2 — Pose gallery | Part 3 — Angle reference | Quick reference card